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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8756779_8757312_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8756779 - 8757312

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGTTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTCTCATTT

Flanking Amino Acid:

FNVLFDGLSKLAADPDPNVK

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

77.5

0.62

0.9

72.2

37.8

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

62.3

0.47

1.8

83.64

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040043

8754980 - 8760700

5721