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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8757481_8758338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8757481 - 8758338

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

TGCTCCTCAGTG

Flanking Amino Acid:

LAACSIALGKDSGLYLKELI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

70.5

38.9

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

71.2

0.48

0.8

64.8

30.8

Minor 5ss

29.5

-2.3

3.4

38.5

46.7

Minor BPS

49.5

-0.1

1.9

56.4

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040043

8754980 - 8760700

5721