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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8816258_8818547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8816258 - 8818547

Intron Length:

2290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCGTTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGGGAT

U12 Branch Point Sequence:

AGGGGCATATGT

Flanking Amino Acid:

PSLRFGDVPFGFPRTLSCRL

Intron Amino Acid Position:

587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.6

38.9

Major BPS

45.9

-0.2

1.4

40.8

41.4

Major PPT

73.9

0.54

0.9

Minor 5ss

31.3

-2.1

3.3

40.9

45.3

Minor BPS

35.1

-1

2.2

47.45

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007065

8814998 - 8857070

42073