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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8821360_8822772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8821360 - 8822772

Intron Length:

1413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

GGTTCCTTACAC

Flanking Amino Acid:

VFVGSAHSYEAVLFNKGAID

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.5

39.2

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

78.2

0.63

0.8

72.5

32.2

Minor 5ss

31.9

-2.1

38.5

46.6

Minor BPS

60.9

0.32

1.8

69.56

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007065

8814998 - 8857070

42073