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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8834811_8840729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8834811 - 8840729

Intron Length:

5919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

CTGAGCTGAGCC

Flanking Amino Acid:

SSSLQVHYDTGEDVHTSLYG

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

74.9

35.3

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

77.9

0.63

0.9

72.1

37.9

Minor 5ss

27.6

-2.6

32.2

42.5

Minor BPS

42.9

-0.5

2.1

51.79

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007065

8814998 - 8857070

42073