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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8847489_8851604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8847489 - 8851604

Intron Length:

4116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTTTGCTGATCC

Flanking Amino Acid:

HILFTPEENKDYFHELTCIT

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

70.4

35.4

Major BPS

70.8

0.52

70.6

31.6

Major PPT

86.8

0.83

0.7

81.5

23.5

Minor 5ss

26.8

-2.7

2.8

31.2

42.4

Minor BPS

54.8

0.13

2.1

75.27

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007065

8814998 - 8857070

42073