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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8922647_8922793_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8922647 - 8922793

Intron Length:
147

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAAGGAGC

5'SS Class:
major

3'SS Sequence:
CCTCTCCTCGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAA

U12 Branch Point Sequence:
TCTGCTCAAACT

Flanking Amino Acid:
ENSEAFKSGRYVTVQGISGT

Intron Amino Acid Position:
136

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.7
1
67.8
43.5

Major BPS
70.6
0.51
1.1
71.6
36.4

Major PPT
78
0.63
0.7
72.3
25.7

Minor 5ss
32.2
-2
3.1
34.8
41.4

Minor BPS
48.7
-0
2.1
71.75
45.6

Associated Gene:

Gene:
GOT2

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8918563 - 8977405
58843

8918563 - 8926419
7857