Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_8928767_8928844_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8928767 - 8928844

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

GGTGTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCACAA

U12 Branch Point Sequence:

GGAGGCACAACC

Flanking Amino Acid:

LIIIGDQEDKIIAALVTEPE

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

37.3

Major BPS

44.3

-0.3

1.2

46.7

38.9

Major PPT

66.5

0.37

0.9

58.7

38.3

Minor 5ss

35.2

-1.7

3.2

41.6

38.8

Minor BPS

39.5

-0.8

2.1

46.36

41.8

Associated Gene:

Gene:

SLC38A7

Ensembl Gene ID:

ENSAPLG00000007029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007310

8928005 - 8932947

4943