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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8934484_8939718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8934484 - 8939718

Intron Length:

5235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TCCAAGCTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

37.8

-1

2.3

41.26

43.4

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021365

8934191 - 8991694

57504