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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8939994_8944292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8939994 - 8944292

Intron Length:

4299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TGTTTGTTACCA

Flanking Amino Acid:

YRASQQEIQHIVNRHGPEAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.2

36.4

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

87.5

0.84

0.8

80.2

37.3

Minor 5ss

38.5

-1.3

2.8

50.4

39.2

Minor BPS

51.8

0.05

2.3

71.26

41.2

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976