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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8945210_8945730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8945210 - 8945730

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTGTG

5'SS Class:

major

3'SS Sequence:

TTACCTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

CTCTATTTAACT

Flanking Amino Acid:

AIDNPLHYQKSLKPSPHLFA

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.3

68.8

42.3

Major BPS

80.4

0.76

80.3

31.8

Major PPT

80.7

0.69

0.9

34.7

Minor 5ss

37.8

-1.4

3.1

49.2

47.1

Minor BPS

0.67

1.5

80.33

41.9

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976