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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8945953_8946377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8945953 - 8946377

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTCAAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTGACTTTAGTT

Flanking Amino Acid:

NSFSSDLRGFAAQFIKQKLP

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

62.8

0.29

1.2

64.7

40.6

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

61.2

0.43

1.6

76.32

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976