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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8950740_8952364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8950740 - 8952364

Intron Length:

1625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGGATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TTTTTCTGGATG

Flanking Amino Acid:

EVLIDVLKELNPSLDFKVVT

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

0.56

69.6

40.7

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

63.1

0.27

1.5

70.54

36.9

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976