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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8952536_8953112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8952536 - 8953112

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTACACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AAGACCTAAACT

Flanking Amino Acid:

YRPWKHAEGQLSFIQHSLIN

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

84.1

30.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.54

0.9

67.5

37.7

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

59.6

0.38

1.7

72.54

43.9

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007513

8939719 - 8991694

51976

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504