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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8953241_8954191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8953241 - 8954191

Intron Length:

951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAACCTG

5'SS Class:

major

3'SS Sequence:

TTCCTTTCGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAG

U12 Branch Point Sequence:

TTTTCCTTTCGT

Flanking Amino Acid:

PEDDNREIATWKSLDLIESL

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

58.7

45.8

Major BPS

60.1

0.25

1.6

60.7

45.9

Major PPT

75.4

0.57

0.9

77.1

31.6

Minor 5ss

-1

3.2

52.9

45.3

Minor BPS

44.9

-0.3

3.8

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976