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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8956685_8956915_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8956685 - 8956915

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

TGTTTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATTAA

U12 Branch Point Sequence:

TTAAGCTGACTT

Flanking Amino Acid:

WLTDKIREHGEPFIQACMTF

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

53.8

44.9

Major BPS

51.6

0.04

1.2

43.8

38.9

Major PPT

85.9

0.81

0.7

84.9

29.9

Minor 5ss

-2.4

3.3

29.6

43.3

Minor BPS

45.4

-0.2

2.1

66.4

44.2

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007513

8939719 - 8991694

51976

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504