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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8957068_8961608_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8957068 - 8961608

Intron Length:

4541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGGCA

5'SS Class:

major

3'SS Sequence:

TCCTCTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TGATGCCTCACT

Flanking Amino Acid:

TMLACLQACAGSVSQELSET

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

66.7

39.1

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

73.1

0.52

0.8

65.4

36.2

Minor 5ss

29.1

-2.4

3.4

30.5

42.8

Minor BPS

46.1

-0.2

2.4

70.43

45.8

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976