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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8963841_8964957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8963841 - 8964957

Intron Length:

1117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTAAT

U12 Branch Point Sequence:

TTTTTTTTAACA

Flanking Amino Acid:

PTFQQSKMKPSDLSQVWPEA

Intron Amino Acid Position:

787

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

70.9

39.3

Major BPS

60.4

0.26

1.3

61.4

43.2

Major PPT

90.7

0.92

0.7

88.7

26.8

Minor 5ss

-1.5

3.4

55.1

43.5

Minor BPS

86.3

1.14

0.8

90.59

23.6

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976