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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8965083_8965788_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8965083 - 8965788

Intron Length:

706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

AATTTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

CTGGTATTAACA

Flanking Amino Acid:

PPHPTMSVDEVLEMLQRFKD

Intron Amino Acid Position:

829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.5

21.5

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

0.7

0.9

74.5

39.4

Minor 5ss

42.8

-0.8

2.8

59.5

Minor BPS

0.12

1.8

63.46

43.2

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976