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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8969013_8970055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8969013 - 8970055

Intron Length:

1043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CTGTTCTTACCT

Flanking Amino Acid:

TGVSFKKDVPPSINTTNIDT

Intron Amino Acid Position:

1028

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

82.1

37.7

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

0.76

0.8

77.4

31.5

Minor 5ss

45.8

-0.4

2.9

67.6

43.1

Minor BPS

65.7

0.57

1.7

78.77

43.9

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976