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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8970197_8970949_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8970197 - 8970949

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGGAGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCATAT

U12 Branch Point Sequence:

TTTTTCTCTCCT

Flanking Amino Acid:

NLSQSNMTQKVEELKETVKE

Intron Amino Acid Position:

1075

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.1

1.16

0.7

90.9

28.7

Major BPS

61.9

0.3

1.1

58.6

38.7

Major PPT

54.6

0.1

1.2

48.9

43.2

Minor 5ss

-2.4

3.8

41.5

45.1

Minor BPS

42.2

-0.5

3.7

79.84

42.1

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976