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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8971130_8972147_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8971130 - 8972147

Intron Length:

1018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

GCTTTTTTCATT

Flanking Amino Acid:

VLNETYRNIKVLLTSDKAAA

Intron Amino Acid Position:

1135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.9

30.1

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

0.7

0.8

82.4

27.9

Minor 5ss

-2.1

2.8

42.5

44.3

Minor BPS

55.5

0.25

1.7

71.21

40.9

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976