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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8972265_8972562_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8972265 - 8972562

Intron Length:

298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCTTC

5'SS Class:

major

3'SS Sequence:

TGGTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTCCACTTACCA

Flanking Amino Acid:

LAKNKPILHTDLDVKSLLLE

Intron Amino Acid Position:

1174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

69.6

37.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

83.7

0.76

0.9

81.2

36.5

Minor 5ss

43.4

-0.7

59.7

45.1

Minor BPS

56.3

0.19

1.8

69.79

42.3

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007513

8939719 - 8991694

51976

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504