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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8972674_8973243_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8972674 - 8973243

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAA

U12 Branch Point Sequence:

TTTTGTGTAATG

Flanking Amino Acid:

KVLESSVRSVVFRPPNPWTM

Intron Amino Acid Position:

1211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

93.2

0.97

0.6

88.8

20.4

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

49.2

-0.2

2.4

66.31

42.6

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976