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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8973322_8973657_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8973322 - 8973657

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAACATC

5'SS Class:

major

3'SS Sequence:

ATTTGTTGTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TGTGACATAACC

Flanking Amino Acid:

AELHQEHDLKLNLKFEIEVL

Intron Amino Acid Position:

1237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

72.3

37.6

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

78.3

0.64

72.7

41.8

Minor 5ss

-0.5

60.8

38.1

Minor BPS

53.7

0.1

1.9

69.46

41.3

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976