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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8973836_8974329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8973836 - 8974329

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTGTGTTCTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

AATGCTTCAATA

Flanking Amino Acid:

PEELPPITTTTASTTPATST

Intron Amino Acid Position:

1296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

76.2

32.6

Major BPS

69.8

0.49

70.3

31.8

Major PPT

78.3

0.64

0.9

73.2

37.4

Minor 5ss

37.9

-1.4

2.7

45.5

37.1

Minor BPS

54.5

0.14

1.6

62.96

37.7

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976

ENSAPLT00000039455

8939719 - 8992037

52319