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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8974461_8974934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8974461 - 8974934

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

AACCCTCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

ACATTCCTAACC

Flanking Amino Acid:

LAPHITLNPTIPLFQAHPQL

Intron Amino Acid Position:

1340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

85.6

31.2

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

69.3

0.43

0.9

58.8

37.4

Minor 5ss

39.1

-1.2

3.4

45.5

Minor BPS

58.9

0.26

1.7

66.05

39.3

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976