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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8975232_8977461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8975232 - 8977461

Intron Length:

2230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TGCTTTTCAATA

Flanking Amino Acid:

LKNSFATALRAASPQQRDMM

Intron Amino Acid Position:

1439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

73.3

36.4

Major BPS

77.7

0.69

30.2

Major PPT

72.9

0.52

0.9

69.9

35.4

Minor 5ss

34.6

-1.8

3.5

42.5

44.6

Minor BPS

56.1

0.19

1.5

63.32

37.7

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007513

8939719 - 8991694

51976

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504