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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8977603_8977699_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8977603 - 8977699

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CTTTCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

AGTGTCTGAAAT

Flanking Amino Acid:

GPEMDKRLATEFELRKHARQ

Intron Amino Acid Position:

1486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

85.6

0.8

0.7

84.5

23.3

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

52.1

0.14

1.7

69.21

41.2

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007513

8939719 - 8991694

51976

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504