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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8977805_8978387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8977805 - 8978387

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTGCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCTTTTTATT

Flanking Amino Acid:

ERMPEQIRLKVGGVDPKQLA

Intron Amino Acid Position:

1521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

83.9

28.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.6

0.42

1.1

70.7

38.8

Minor 5ss

30.4

-2.2

3.2

46.4

Minor BPS

61.5

0.44

1.6

80.48

35.3

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976