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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8978508_8979081_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8978508 - 8979081

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGATT

5'SS Class:

major

3'SS Sequence:

TTCTCTTAAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

CTTCTCTTAAGC

Flanking Amino Acid:

PTGFLAQPMKQAWATDDVAQ

Intron Amino Acid Position:

1561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

75.8

39.8

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

76.4

0.59

0.9

74.3

34.1

Minor 5ss

36.2

-1.6

3.7

56.4

Minor BPS

63.2

0.39

1.7

71.01

40.5

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976