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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8979274_8980998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8979274 - 8980998

Intron Length:

1725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GCATCTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CCTCTGCTAACA

Flanking Amino Acid:

AIAALGLLQKAVEGLLDATS

Intron Amino Acid Position:

1625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

66.9

0.38

57.8

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

44.2

-0.4

2.3

56.54

42.9

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007513

8939719 - 8991694

51976

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504