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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8981142_8981717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8981142 - 8981717

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CAAATTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

CACTTGTGAAAA

Flanking Amino Acid:

GSPWCNKQITRCLIECRDEY

Intron Amino Acid Position:

1672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

30.2

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

72.1

0.5

62.1

43.8

Minor 5ss

37.3

-1.4

2.8

49.7

46.6

Minor BPS

42.7

-0.5

2.1

49.86

41.1

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976