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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8981827_8981925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8981827 - 8981925

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTGGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TCAGCCTTAATG

Flanking Amino Acid:

MQQYDLHLAQSMENGLNYMA

Intron Amino Acid Position:

1709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

82.5

0.73

0.9

80.6

31.5

Minor 5ss

-2.2

3.2

45.7

Minor BPS

66.4

0.38

1.5

63.75

44.6

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007513

8939719 - 8991694

51976

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504