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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8985369_8986039_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8985369 - 8986039

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGTGAAC

5'SS Class:

weak_major

3'SS Sequence:

TTGATCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TGCCACTGAAAT

Flanking Amino Acid:

TVTKINLLNKVLGIVVGVLL

Intron Amino Acid Position:

1926

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.3

57.9

40.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

80.7

0.69

0.9

77.9

36.4

Minor 5ss

27.6

-2.6

3.1

34.3

41.6

Minor BPS

48.6

-0

1.8

66.14

43.3

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976

ENSAPLT00000039455

8939719 - 8992037

52319