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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8989072_8990124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8989072 - 8990124

Intron Length:

1053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

CTTTTTGTATCT

Flanking Amino Acid:

FLSDLRSNLQVSNEPGNRYN

Intron Amino Acid Position:

2162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.5

28.9

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

78.4

0.64

0.8

78.8

28.4

Minor 5ss

33.5

-1.9

3.3

43.7

38.1

Minor BPS

0.01

2.2

74.38

43.4

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976