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Intron Name: Anas_platyrhynchos_platyrhynchos_12_8991032_8991615_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8991032 - 8991615

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCGTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

AGGCACCTAATG

Flanking Amino Acid:

EFVHCAPEIEKLFQSVAQCC

Intron Amino Acid Position:

2311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.8

23.7

Major BPS

76.8

0.67

40.9

Major PPT

70.5

0.46

68.3

37.4

Minor 5ss

35.6

-1.6

2.8

42.6

38.4

Minor BPS

44.5

-0.5

1.8

46.21

Associated Gene:

Gene:

CNOT1

Ensembl Gene ID:

ENSAPLG00000007162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039455

8939719 - 8992037

52319

ENSAPLT00000021365

8934191 - 8991694

57504

ENSAPLT00000007513

8939719 - 8991694

51976