Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_8997151_8997331_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8997151 - 8997331

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTGTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTGTCTTCATGT

Flanking Amino Acid:

KQLVAFVMAYSFQEPLDEED

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

0.52

0.8

32.6

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

45.8

-0.2

2.1

63.25

47.3

Associated Gene:

Gene:

SETD6

Ensembl Gene ID:

ENSAPLG00000007404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007690

8994569 - 8999204

4636