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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9029990_9033254_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9029990 - 9033254

Intron Length:

3265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GGCTCTCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

GCAGCACTAACT

Flanking Amino Acid:

YNAILVDTPLAAFFQDCISE

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.5

38.7

Major BPS

64.5

0.36

65.2

28.2

Major PPT

0.61

0.9

37.3

Minor 5ss

26.2

-2.7

2.9

22.7

37.4

Minor BPS

46.9

-0.1

63.76

45.6

Associated Gene:

Gene:

ATP6V0D1

Ensembl Gene ID:

ENSAPLG00000007502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040679

9018075 - 9040093

22019

ENSAPLT00000007814

9015130 - 9040093

24964