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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9033335_9038259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9033335 - 9038259

Intron Length:

4925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAT

U12 Branch Point Sequence:

GAGCGCTCATTT

Flanking Amino Acid:

IEIIRNTLYKAYLESFYKFC

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

74.7

35.6

Major BPS

67.4

0.43

1.2

38.9

Major PPT

85.4

0.8

0.7

80.1

25.2

Minor 5ss

31.4

-2.1

3.2

39.6

46.4

Minor BPS

40.5

-0.6

51.7

42.7

Associated Gene:

Gene:

ATP6V0D1

Ensembl Gene ID:

ENSAPLG00000007502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040679

9018075 - 9040093

22019

ENSAPLT00000007814

9015130 - 9040093

24964