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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9039432_9039931_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9039432 - 9039931

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GGGCTTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAC

U12 Branch Point Sequence:

AGGTGGACAAGT

Flanking Amino Acid:

TLEDRFFEHEVKLNKLAFLN

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

54.8

0.12

1.1

46.8

37.9

Major PPT

67.1

0.39

57.7

43.2

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

31.9

-1.2

2.5

48.04

44.4

Associated Gene:

Gene:

ATP6V0D1

Ensembl Gene ID:

ENSAPLG00000007502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040679

9018075 - 9040093

22019

ENSAPLT00000007814

9015130 - 9040093

24964