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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9061016_9061282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9061016 - 9061282

Intron Length:

267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

CCTCTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

GCCACCCCATTC

Flanking Amino Acid:

RRRSRGNRKSLRRTLKSGLS

Intron Amino Acid Position:

1210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

59.2

39.9

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

0.56

0.7

24.7

Minor 5ss

-1.9

41.2

Minor BPS

38.2

-0.9

1.9

40.66

39.2

Associated Gene:

Gene:

FHOD1

Ensembl Gene ID:

ENSAPLG00000007626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047991

9060933 - 9070975

10043

ENSAPLT00000007955

9060610 - 9069967

9358