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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9061708_9061798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9061708 - 9061798

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

TGCTCGCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

GTGTCCCCAACG

Flanking Amino Acid:

NKTRGRLITETEKFSGIAEA

Intron Amino Acid Position:

1098

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

65.7

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

73.1

0.52

0.9

65.8

Minor 5ss

28.5

-2.5

3.6

41.2

45.5

Minor BPS

51.3

-0.1

61.62

45.5

Associated Gene:

Gene:

FHOD1

Ensembl Gene ID:

ENSAPLG00000007626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047991

9060933 - 9070975

10043

ENSAPLT00000007955

9060610 - 9069967

9358