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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9062267_9062343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9062267 - 9062343

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

ACCACCACCACC

Flanking Amino Acid:

EIASITRSAKVDFDELANSL

Intron Amino Acid Position:

970

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.2

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

0.63

0.7

69.1

31.5

Minor 5ss

25.6

-2.8

30.5

42.8

Minor BPS

40.2

-0.7

2.1

46.61

42.2

Associated Gene:

Gene:

FHOD1

Ensembl Gene ID:

ENSAPLG00000007626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047991

9060933 - 9070975

10043

ENSAPLT00000007955

9060610 - 9069967

9358