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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9062506_9062695_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9062506 - 9062695

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTGGGGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CCCTGCTGAGTC

Flanking Amino Acid:

AMGNFLNGSQSRGFELGYLE

Intron Amino Acid Position:

916

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

78.2

31.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

67.4

0.39

1.1

61.5

48.6

Minor 5ss

27.1

-2.6

42.4

Minor BPS

42.2

-0.6

46.19

43.5

Associated Gene:

Gene:

FHOD1

Ensembl Gene ID:

ENSAPLG00000007626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047991

9060933 - 9070975

10043

ENSAPLT00000007955

9060610 - 9069967

9358