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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9063242_9063431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9063242 - 9063431

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTGCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GAGTCCTGACGT

Flanking Amino Acid:

EFAVNKEGIEKILTMVPTEE

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

68.9

0.47

59.2

39.1

Major PPT

70.4

0.46

0.9

62.3

39.8

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

46.8

-0.1

62.8

46.6

Associated Gene:

Gene:

FHOD1

Ensembl Gene ID:

ENSAPLG00000007626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047991

9060933 - 9070975

10043

ENSAPLT00000007955

9060610 - 9069967

9358