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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9065752_9066128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9065752 - 9066128

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

GGGGGCTAACCC

Flanking Amino Acid:

VYKLHQPVPVWREDAPSLHG

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

83.3

0.75

0.8

81.6

30.5

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

38.3

-0.9

2.2

42.95

44.4

Associated Gene:

Gene:

FHOD1

Ensembl Gene ID:

ENSAPLG00000007626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007955

9060610 - 9069967

9358