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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9067110_9067202_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9067110 - 9067202

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCTGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCAAC

U12 Branch Point Sequence:

CCGTCCCAACCC

Flanking Amino Acid:

LVFAMTLINKTLAALPDQDS

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

49.7

-0

1.3

58.6

35.9

Major PPT

68.9

0.43

61.1

40.1

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

42.2

-0.6

2.2

50.12

46.8

Associated Gene:

Gene:

FHOD1

Ensembl Gene ID:

ENSAPLG00000007626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047991

9060933 - 9070975

10043

ENSAPLT00000007955

9060610 - 9069967

9358