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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9067298_9067531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9067298 - 9067531

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

TCGCTTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

GTCACCTGCACC

Flanking Amino Acid:

RAVNAVDQARGVCLWSNLMA

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

72.5

0.51

0.9

64.4

41.4

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

48.6

-0.1

60.91

43.9

Associated Gene:

Gene:

FHOD1

Ensembl Gene ID:

ENSAPLG00000007626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047991

9060933 - 9070975

10043

ENSAPLT00000007955

9060610 - 9069967

9358