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Intron Name: Anas_platyrhynchos_platyrhynchos_12_9068307_9068395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9068307 - 9068395

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGACAAT

U12 Branch Point Sequence:

TGCACTGGGACA

Flanking Amino Acid:

SLFSLKQLFQEDKDLVPEFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

-0.4

1.5

44.8

Major PPT

78.8

0.65

0.7

73.4

24.8

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

42.2

-0.6

2.1

52.18

39.8

Associated Gene:

Gene:

FHOD1

Ensembl Gene ID:

ENSAPLG00000007626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047991

9060933 - 9070975

10043

ENSAPLT00000007955

9060610 - 9069967

9358